Tag Archives: devel

installing CP2 on ubuntu 11.10

27 Mar

slightly different than for 10.10: python-stuff: sudo aptitude install cython python-numpy python-scipy \ python-setuptools python-matplotlib python-wxgtk2.8 python-decorator \ python-mysqldb python-nose python-dev python-h5py java: sudo aptitude install openjdk-6-jdk openjdk-6-jre export JAVA_HOME=’/usr/lib/jvm/java-6-openjdk’ export LD_LIBRARY_PATH=’/usr/lib/jvm/java-6-openjdk/jre/lib/amd64/server’ Cell Profiler: git clone https://github.com/CellProfiler/CellProfiler.git cd CellProfiler/ run … Read More »

installing CP2 on ubuntu 10.10

27 Mar

python-stuff: sudo aptitude install cython python-numpy python-scipy \ python-setuptools python-numeric python-matplotlib python-wxgtk2.8 \ python-decorator python-mysqldb python-nose python-dev python-h5py java: sudo aptitude install openjdk-6-jdk openjdk-6-jre export JAVA_HOME=’/usr/lib/jvm/java-6-openjdk’ export LD_LIBRARY_PATH=’/usr/lib/jvm/java-6-openjdk/jre/lib/amd64/server’ Cell Profiler: git clone https://github.com/CellProfiler/CellProfiler.git cd CellProfiler/ run it: python ./CellProfiler.py

git cheatsheet

24 Aug

browsing the git history in a compact yet still highly condensed view containing all important information: git log —graph —source —oneline —branches —tags

migrate from SVN to GIT

3 May

a short cheat sheet of commands I used several times to migrate SVN-repositories to GIT… preparation sudo aptitude install subversion git-svn svn co https://my.server.private/repos/my_repo cd my_repo svn log q | grep v ‘^*$’ | cut -d ‘|’ -f 2 | … Read More »