my 2 cents
Another one in the long series of same same, but different installation instructions for CellProfiler: CP2 on 11.10 CP2 on 15.04 The following has been tested on a fresh Linux Mint 17.3. The goal of these instructions is to use … Read More »
Again, some things have changed since 11.10. The following has been tested on a fresh Ubuntu “server” installation, 15.04. The goal of these instructions is to use packages provided by the Linux distribution wherever possible, and to install the rest … Read More »
slightly different than for 10.10: python-stuff: sudo aptitude install cython python-numpy python-scipy \ python-setuptools python-matplotlib python-wxgtk2.8 python-decorator \ python-mysqldb python-nose python-dev python-h5py java: sudo aptitude install openjdk-6-jdk openjdk-6-jre export JAVA_HOME=’/usr/lib/jvm/java-6-openjdk’ export LD_LIBRARY_PATH=’/usr/lib/jvm/java-6-openjdk/jre/lib/amd64/server’ Cell Profiler: git clone https://github.com/CellProfiler/CellProfiler.git cd CellProfiler/ run … Read More »
python-stuff: sudo aptitude install cython python-numpy python-scipy \ python-setuptools python-numeric python-matplotlib python-wxgtk2.8 \ python-decorator python-mysqldb python-nose python-dev python-h5py java: sudo aptitude install openjdk-6-jdk openjdk-6-jre export JAVA_HOME=’/usr/lib/jvm/java-6-openjdk’ export LD_LIBRARY_PATH=’/usr/lib/jvm/java-6-openjdk/jre/lib/amd64/server’ Cell Profiler: git clone https://github.com/CellProfiler/CellProfiler.git cd CellProfiler/ run it: python ./CellProfiler.py